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Intron Name: Anas_platyrhynchos_platyrhynchos_24_551957_552126_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

551957 - 552126

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTCCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

GTTCTCTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

79.1

0.72

69.3

38.4

Major PPT

80.9

0.69

0.7

77.1

31.4

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

62.3

0.47

1.6

77.8

38.7

Associated Gene:

Gene:

PPP1R8

Ensembl Gene ID:

ENSAPLG00000001009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040771

525291 - 552803

27513