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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5539843_5539932_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5539843 - 5539932

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCCAAGCGG

5'SS Class:

weak_major

3'SS Sequence:

CCACCACCACCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTACCAC

U12 Branch Point Sequence:

ACCACCACCACC

Flanking Amino Acid:

FAKSHSLEAPSRHGKRSKSK

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.3

45.2

42.4

Major BPS

47.3

-0.1

1.3

56.2

Major PPT

57.7

0.17

0.9

48.2

34.1

Minor 5ss

15.1

-4

3.5

21.6

37.2

Minor BPS

40.2

-0.7

2.1

46.61

42.2

Associated Gene:

Gene:

DLGAP3

Ensembl Gene ID:

ENSAPLG00000003910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021140

5539315 - 5542558

3244