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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5540351_5544768_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5540351 - 5544768

Intron Length:

4418

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAGGGCTG

5'SS Class:

strong_major

3'SS Sequence:

GGGGCTCCCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGCGAC

U12 Branch Point Sequence:

CCCGCCGCGACG

Flanking Amino Acid:

SLPVPAGEGASLPDSGRASP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

70.5

39.8

Major BPS

39.7

-0.6

1.2

27.1

32.7

Major PPT

59.1

0.21

50.7

39.3

Minor 5ss

22.6

-3.2

4.3

37.1

47.5

Minor BPS

38.8

-1

2.2

37.75

45.5

Associated Gene:

Gene:

DLGAP3

Ensembl Gene ID:

ENSAPLG00000003910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047896

5540160 - 5546085

5926