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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5542095_5542250_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5542095 - 5542250

Intron Length:

156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAACTGTC

5'SS Class:

weak_major

3'SS Sequence:

GTGCTCCCCTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCGGAT

U12 Branch Point Sequence:

GATGCTGCAGGT

Flanking Amino Acid:

ASRHYSDSYISSPAPPGSVP

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.3

63.9

Major BPS

43.5

-0.4

1.5

36.8

44.4

Major PPT

49.2

-0

1.7

58.6

38.4

Minor 5ss

45.7

-0.5

3.2

70.9

39.4

Minor BPS

34.5

-1

2.3

49.58

44.1

Associated Gene:

Gene:

DLGAP3

Ensembl Gene ID:

ENSAPLG00000003910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021140

5539315 - 5542558

3244

ENSAPLT00000020475

5536948 - 5546085

9138

ENSAPLT00000004023

5537778 - 5546085

8308