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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5543253_5543532_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

5543253 - 5543532

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTGTCCCTC

5'SS Class:

weak_minor

3'SS Sequence:

CTGTGCCCGCCAG|C

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

GTGGCCCTAATG

Flanking Amino Acid:

ESLESSKVTALALAHPRVHP

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

-0.3

1.3

41.7

Major BPS

69.6

0.49

1.1

69.5

Major PPT

62.9

0.29

54.7

41.4

Minor 5ss

51.8

0.06

2.7

38.4

Minor BPS

50.2

-0.1

1.9

56.62

Associated Gene:

Gene:

DLGAP3

Ensembl Gene ID:

ENSAPLG00000003910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020475

5536948 - 5546085

9138

ENSAPLT00000004023

5537778 - 5546085

8308