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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5544912_5545143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5544912 - 5545143

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TGCCCTGCCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAC

U12 Branch Point Sequence:

GAGAACTGACCG

Flanking Amino Acid:

EAEDYDLPEEILEKIRSAVG

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

56.9

42.6

Major BPS

64.8

0.37

0.9

55.1

32.8

Major PPT

64.1

0.32

0.9

61.5

34.9

Minor 5ss

27.9

-2.5

27.6

37.5

Minor BPS

-0.8

1.9

40.45

42.6

Associated Gene:

Gene:

DLGAP3

Ensembl Gene ID:

ENSAPLG00000003910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042799

5539315 - 5546085

6771

ENSAPLT00000030901

5537391 - 5546085

8695

ENSAPLT00000020475

5536948 - 5546085

9138

ENSAPLT00000004023

5537778 - 5546085

8308

ENSAPLT00000047896

5540160 - 5546085

5926