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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5545236_5545343_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5545236 - 5545343

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCGAT

U12 Branch Point Sequence:

TGTGGGATGACG

Flanking Amino Acid:

QFYRLCQQNMDPNAFPVPTF

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

47.9

-0.1

1.3

43.9

40.8

Major PPT

79.6

0.67

0.8

74.1

31.1

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

37.6

-1.1

2.6

47.97

45.5

Associated Gene:

Gene:

DLGAP3

Ensembl Gene ID:

ENSAPLG00000003910

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042799

5539315 - 5546085

6771

ENSAPLT00000030901

5537391 - 5546085

8695

ENSAPLT00000020475

5536948 - 5546085

9138

ENSAPLT00000004023

5537778 - 5546085

8308

ENSAPLT00000047896

5540160 - 5546085

5926