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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5769020_5772906_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5769020 - 5772906

Intron Length:

3887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGGGCATA

5'SS Class:

major

3'SS Sequence:

ATGAAGTTACGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGTGAT

U12 Branch Point Sequence:

TGATTGGAAACA

Flanking Amino Acid:

LPLLGGKQHSSLCDAQLSAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

Major BPS

61.1

0.28

1.2

52.7

43.2

Major PPT

44.5

-0.3

1.7

40.4

47.2

Minor 5ss

38.6

-1.3

3.3

52.1

45.2

Minor BPS

39.9

-0.7

2.6

55.93

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001778

5765149 - 5772937

7789