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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5800284_5800826_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5800284 - 5800826

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCAAGTCTC

5'SS Class:

major

3'SS Sequence:

TCTCTTTTGCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAC

U12 Branch Point Sequence:

TTGACTTGTACT

Flanking Amino Acid:

SVLGLPRWKWSQNCSHILHG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.4

74.9

37.7

Major BPS

68.7

0.47

1.2

63.1

44.5

Major PPT

0.7

0.9

76.2

37.8

Minor 5ss

30.4

-2.2

45.5

42.6

Minor BPS

51.5

0.13

1.9

73.43

43.2

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464