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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5903052_5910686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5903052 - 5910686

Intron Length:

7635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTTTGCTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

GTCTCTGTATGT

Flanking Amino Acid:

SKDNNQKTSVLTQVGVSQGH

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.8

34.4

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

85.7

0.8

0.7

81.4

30.6

Minor 5ss

48.1

-0.2

2.8

68.1

42.7

Minor BPS

43.5

-0.4

2.4

63.63

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464