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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5945571_5948121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5945571 - 5948121

Intron Length:

2551

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGAGAT

5'SS Class:

major

3'SS Sequence:

CATTCCCTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTCTTCTCATTC

Flanking Amino Acid:

EKRGFNITFTTFRHNECPDP

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

70.6

33.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

72.7

0.51

0.8

70.1

30.4

Minor 5ss

-1.8

3.5

48.9

42.5

Minor BPS

48.1

-0.1

1.8

57.34

42.4

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464