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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5950758_5951486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5950758 - 5951486

Intron Length:

729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCTCACC

5'SS Class:

major

3'SS Sequence:

GCATCCCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

GGTTTTTTCACA

Flanking Amino Acid:

PGYPIKITFDRFKTEVNYDT

Intron Amino Acid Position:

788

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.1

58.8

40.3

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

74.2

0.55

0.9

69.8

36.4

Minor 5ss

34.2

-1.8

44.4

43.1

Minor BPS

57.7

0.24

1.7

68.06

38.5

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464