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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5960770_5964640_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5960770 - 5964640

Intron Length:

3871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

TGTCTTTATATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGGTTATTAAAA

Flanking Amino Acid:

VWSSPLPRCVAECGSSVTGT

Intron Amino Acid Position:

1088

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

68.8

42.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

77.3

0.62

0.9

73.2

36.4

Minor 5ss

33.2

-1.9

3.5

45.9

44.6

Minor BPS

56.3

0.19

1.7

66.43

39.5

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464