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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5968853_5973364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5968853 - 5973364

Intron Length:

4512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

CTTTCTGCCACG

Flanking Amino Acid:

TIEAEAGCTIGLHFMVFHTE

Intron Amino Acid Position:

1303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

71.1

37.5

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

71.5

0.48

0.9

66.1

34.9

Minor 5ss

33.7

-1.9

2.8

31.8

42.6

Minor BPS

42.1

-0.7

2.5

54.65

46.9

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464