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Intron Name: Anas_platyrhynchos_platyrhynchos_24_5976299_5978780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5976299 - 5978780

Intron Length:

2482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TGATTGCCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAT

U12 Branch Point Sequence:

CTTTGCTTGATT

Flanking Amino Acid:

FWQPDPPSCTAPCGGILTGP

Intron Amino Acid Position:

1435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

70.5

33.4

Major BPS

66.1

0.4

1.3

59.3

47.1

Major PPT

74.5

0.55

70.4

Minor 5ss

36.8

-1.5

3.3

48.1

47.6

Minor BPS

66.3

0.59

1.8

82.57

39.6

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464