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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6010704_6011186_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6010704 - 6011186

Intron Length:

483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

CCTACGATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TGATTCTGACCT

Flanking Amino Acid:

TEPYNDFITIWDGPQQTAPQ

Intron Amino Acid Position:

2184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.8

78.5

30.1

Major BPS

0.75

78.6

Major PPT

66.6

0.37

0.9

62.3

38.4

Minor 5ss

30.7

-2.2

2.5

31.6

35.9

Minor BPS

0.27

1.8

74.32

42.1

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044002

5996778 - 6014543

17766

ENSAPLT00000004734

5800241 - 6058704

258464