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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6016243_6018030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6016243 - 6018030

Intron Length:

1788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCCT

5'SS Class:

major

3'SS Sequence:

ATGCTTCCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

CTCTCCTTCATG

Flanking Amino Acid:

QFEGPPPTCEVPCPMNEVLT

Intron Amino Acid Position:

2298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

69.4

41.1

Major BPS

0.62

1.1

77.2

Major PPT

77.7

0.62

0.9

74.4

35.8

Minor 5ss

32.7

-2

3.4

48.4

47.3

Minor BPS

58.8

0.13

1.9

62.41

46.2

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464