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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6025764_6027225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6025764 - 6027225

Intron Length:

1462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

GGATCTCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CTTACTGTAATT

Flanking Amino Acid:

SIGEPMPTCKIISCGDLPTP

Intron Amino Acid Position:

2600

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

31.9

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

74.2

0.55

69.9

41.2

Minor 5ss

32.4

-2

3.3

39.8

Minor BPS

55.1

0.24

2.1

75.87

41.7

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464