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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6027942_6031239_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6027942 - 6031239

Intron Length:

3298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTTCTGATTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GATTTCTGATTG

Flanking Amino Acid:

RWSGKTPVCVPITCGHPGNP

Intron Amino Acid Position:

2735

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.3

72.7

44.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

79.2

0.66

0.8

74.3

35.1

Minor 5ss

40.3

-1.1

2.8

41.7

Minor BPS

48.4

-0.2

1.7

53.91

41.2

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464