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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6043463_6044258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6043463 - 6044258

Intron Length:

796

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCGCT

5'SS Class:

major

3'SS Sequence:

TTTCCTTTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGCCAC

U12 Branch Point Sequence:

TTAGCCACAAGT

Flanking Amino Acid:

TWTGTTPECTVINCGDPGVP

Intron Amino Acid Position:

3034

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

65.8

40.2

Major BPS

47.8

-0.1

1.3

56.1

40.7

Major PPT

82.4

0.73

0.9

80.4

31.6

Minor 5ss

32.1

-2

3.6

47.1

48.5

Minor BPS

46.7

-0.1

2.2

70.19

46.1

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464