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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6051531_6053583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6051531 - 6053583

Intron Length:

2053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TTGTGCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GGAATCTCACCT

Flanking Amino Acid:

TWSGVQPDCVPHHCKQPETP

Intron Amino Acid Position:

3272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

79.1

37.5

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

83.8

0.76

0.9

36.6

Minor 5ss

-0.2

2.8

71.9

38.1

Minor BPS

45.7

-0.2

1.8

59.44

43.2

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464