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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6055803_6056547_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6055803 - 6056547

Intron Length:

745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

CATGTCATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AATGTGTTAATC

Flanking Amino Acid:

KNDKWALDGHVSSESSSGTF

Intron Amino Acid Position:

3446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.3

35.3

Major BPS

84.4

0.85

34.5

Major PPT

73.9

0.54

0.9

66.5

Minor 5ss

34.4

-1.8

3.1

40.8

38.7

Minor BPS

-0

2.1

60.96

38.9

Associated Gene:

Gene:

CSMD2

Ensembl Gene ID:

ENSAPLG00000004505

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004734

5800241 - 6058704

258464