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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6098612_6098821_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6098612 - 6098821

Intron Length:

210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

AGCCCCCCAGCT

Flanking Amino Acid:

PGMPGPPGIPGLPGIPGHAL

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

0.28

1.1

63.1

35.8

Major PPT

72.1

0.5

0.8

65.1

30.5

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

42.6

-0.4

58.34

43.8

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003617

6098121 - 6106859

8739

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739