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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6098900_6099050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6098900 - 6099050

Intron Length:

151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

CTCCCCCCCACA

Flanking Amino Acid:

AGQIGNIGPKGKRGEKGERG

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

76.2

39.9

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

71.4

0.48

0.7

64.4

24.2

Minor 5ss

-1.9

3.5

49.2

47.1

Minor BPS

42.1

-0.6

2.2

53.63

44.5

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739