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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6099240_6099336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6099240 - 6099336

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCCCTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

TCTGCCCTACAG

Flanking Amino Acid:

IVDVVLKMLQEQLAEVAVSA

Intron Amino Acid Position:

474

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

76.3

0.59

0.8

68.7

31.9

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

44.4

-0.5

2.1

52.92

47.4

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003617

6098121 - 6106859

8739

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739