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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6099392_6099958_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6099392 - 6099958

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TCACTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CCTCCTCTCACT

Flanking Amino Acid:

PGMPGQRGVAGRDAGDQHIV

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.3

34.6

Major BPS

72.7

0.56

30.1

Major PPT

68.1

0.41

0.9

60.9

Minor 5ss

-2.1

2.6

39.1

38.9

Minor BPS

46.9

-0.1

2.1

65.42

45.3

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739