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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6100297_6100422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6100297 - 6100422

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGGC

5'SS Class:

major

3'SS Sequence:

CCTCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATTTCTTTCATC

Flanking Amino Acid:

HGLAGVKGEKGESGEPGPKG

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

67.5

37.8

Major BPS

87.6

0.93

0.9

89.3

Major PPT

73.3

0.52

0.8

64.5

36.5

Minor 5ss

28.2

-2.5

3.7

40.6

Minor BPS

66.1

0.49

1.7

76.18

34.5

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739