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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6100795_6101234_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6100795 - 6101234

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCACA

5'SS Class:

major

3'SS Sequence:

CCTCAATTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

CTTTCCTCAATT

Flanking Amino Acid:

VGAPGEQGRTGPKGEQGPPG

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

38.8

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

75.3

0.57

0.9

65.3

39.9

Minor 5ss

34.7

-1.7

2.8

41.9

44.5

Minor BPS

75.5

0.88

1.5

88.16

37.4

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739

ENSAPLT00000031555

6098121 - 6106859

8739