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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6101289_6101360_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6101289 - 6101360

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

TGCCCCTGACCT

Flanking Amino Acid:

QGPQGVPGPKGDRGERGLVG

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

85.8

0.81

0.8

80.4

31.6

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

53.1

0.18

1.8

71.32

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739