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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6101766_6101877_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6101766 - 6101877

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTATCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCTAT

U12 Branch Point Sequence:

CTCTGTCTATCC

Flanking Amino Acid:

PGSKGGPGDKGEVGARGQPG

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

58.6

0.22

1.4

58.5

47.9

Major PPT

76.7

0.6

0.9

35.6

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

42.5

-0.5

2.2

53.94

44.5

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739

ENSAPLT00000031555

6098121 - 6106859

8739