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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6101923_6102048_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6101923 - 6102048

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTAGG

5'SS Class:

major

3'SS Sequence:

CGTGTTTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

GGGGTCTGATCC

Flanking Amino Acid:

PGPPGHRGQAGLPGQPGSKG

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.1

62.1

43.9

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

74.7

0.56

0.9

68.9

37.1

Minor 5ss

32.6

-2

2.8

43.3

43.7

Minor BPS

44.1

-0.4

1.7

48.18

41.4

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739