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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6102807_6102891_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6102807 - 6102891

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

TCAGCCCTATTA

Flanking Amino Acid:

VGTIGAAGRPGREGPRGPPG

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

71.8

0.49

0.7

65.8

23.1

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

46.1

-0.3

56.46

43.1

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739