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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6104351_6104523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6104351 - 6104523

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCGCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

GGGAGCTCACCC

Flanking Amino Acid:

KGPQGLQGLKGHRGRPGTLG

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

78.2

31.2

Major BPS

0.28

1.1

63.1

35.8

Major PPT

72.7

0.51

0.8

69.7

31.1

Minor 5ss

27.1

-2.6

42.4

Minor BPS

39.9

-0.7

2.1

44.92

42.9

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739