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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6104581_6104895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6104581 - 6104895

Intron Length:

315

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAGCT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

QGLEGSADFLCPTNCPPGPK

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

0.9

70.4

33.4

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

100

1.12

0.4

100

Minor 5ss

27.8

-2.6

3.3

36.6

41.5

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739