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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6105135_6105434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6105135 - 6105434

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

CCCTAAATAAAT

Flanking Amino Acid:

PGEIGALGPKGDPGPDGPRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

65.7

0.39

71.3

30.3

Major PPT

83.1

0.74

0.8

77.1

37.1

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

41.9

-0.5

56.25

45.3

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031555

6098121 - 6106859

8739

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739