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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6105489_6105629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6105489 - 6105629

Intron Length:

141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TCTTCTCCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAA

U12 Branch Point Sequence:

GCTCGCTGAATG

Flanking Amino Acid:

LQGPSLPGPPGLPGQVGLPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.3

70.1

40.6

Major BPS

54.6

0.12

1.1

46.7

38.9

Major PPT

75.8

0.58

79.8

26.1

Minor 5ss

37.2

-1.4

3.3

55.2

42.1

Minor BPS

46.5

-0.4

1.9

50.4

43.7

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022759

6098121 - 6106859

8739

ENSAPLT00000003617

6098121 - 6106859

8739