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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6106185_6106663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6106185 - 6106663

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

TCTCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

GTGGCAGTGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.9

35.3

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

85.8

0.8

0.7

80.4

24.8

Minor 5ss

32.9

-1.9

2.6

37.5

32.2

Minor BPS

43.3

-0.5

2.3

55.33

43.2

Associated Gene:

Gene:

COL9A2

Ensembl Gene ID:

ENSAPLG00000003493

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003617

6098121 - 6106859

8739