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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6130195_6130328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6130195 - 6130328

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCAG

5'SS Class:

major

3'SS Sequence:

TTTTGAATTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTCTTTTGAATT

Flanking Amino Acid:

LDQWTQEQIQCMQEMGNGKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

62.4

43.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

81.3

0.71

0.9

74.9

38.8

Minor 5ss

30.2

-2.3

3.2

38.2

46.7

Minor BPS

66.2

0.59

1.4

79.72

Associated Gene:

Gene:

SMAP2

Ensembl Gene ID:

ENSAPLG00000003192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020321

6124944 - 6133729

8786

ENSAPLT00000003263

6124944 - 6134567

9624