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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6130415_6131041_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

6130415 - 6131041

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

AAGCTTCTTGCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCTTTAA

U12 Branch Point Sequence:

TTGTCTTTAACA

Flanking Amino Acid:

PENFRRPQTDQAVEGFIRDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

74.7

0.61

65.9

40.9

Major PPT

73.4

0.53

0.9

66.3

39.8

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

85.3

1.1

87.04

31.6

Associated Gene:

Gene:

SMAP2

Ensembl Gene ID:

ENSAPLG00000003192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020321

6124944 - 6133729

8786

ENSAPLT00000003263

6124944 - 6134567

9624