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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6131121_6131495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6131121 - 6131495

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTTAGTTCC

5'SS Class:

major

3'SS Sequence:

CTTTCCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

CTTTCCTTTACA

Flanking Amino Acid:

DRSIDINAFRKEKDDKWKKS

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.2

67.9

38.3

Major BPS

73.5

0.58

73.6

32.5

Major PPT

89.2

0.88

0.6

83.6

24.7

Minor 5ss

37.4

-1.4

2.6

38.8

Minor BPS

76.7

0.84

1.6

83.52

Associated Gene:

Gene:

SMAP2

Ensembl Gene ID:

ENSAPLG00000003192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020321

6124944 - 6133729

8786

ENSAPLT00000003263

6124944 - 6134567

9624