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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6131583_6132051_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6131583 - 6132051

Intron Length:

469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTCCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

AAGACTTGAACA

Flanking Amino Acid:

EPIIFEKVKMPQKKEETQQS

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

38.2

Major BPS

65.8

0.39

57.3

39.4

Major PPT

76.5

0.6

0.8

69.7

36.7

Minor 5ss

32.4

-2

37.8

40.6

Minor BPS

55.2

0.16

1.5

60.89

38.7

Associated Gene:

Gene:

SMAP2

Ensembl Gene ID:

ENSAPLG00000003192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020321

6124944 - 6133729

8786

ENSAPLT00000003263

6124944 - 6134567

9624