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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6132666_6132798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6132666 - 6132798

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

AGCTGATTCATT

Flanking Amino Acid:

SVASNSDSRKVTGSMPTSGS

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

81.8

0.71

0.8

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

42.7

-0.4

2.3

59.81

43.9

Associated Gene:

Gene:

SMAP2

Ensembl Gene ID:

ENSAPLG00000003192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020321

6124944 - 6133729

8786

ENSAPLT00000003263

6124944 - 6134567

9624