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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6132965_6133211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6132965 - 6133211

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGAT

5'SS Class:

major

3'SS Sequence:

CCTCCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTTGTTTTATT

Flanking Amino Acid:

GSQTPQLPAQGAMFMAPAQM

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

75.1

35.1

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

85.7

0.8

0.7

83.4

24.8

Minor 5ss

37.6

-1.4

3.5

55.7

48.5

Minor BPS

59.2

0.37

83.31

38.3

Associated Gene:

Gene:

SMAP2

Ensembl Gene ID:

ENSAPLG00000003192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020321

6124944 - 6133729

8786

ENSAPLT00000003263

6124944 - 6134567

9624