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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6143748_6144779_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6143748 - 6144779

Intron Length:

1032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGGCCGACCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGGCAT

U12 Branch Point Sequence:

GCGACGTCCACG

Flanking Amino Acid:

GRQTLATPPDGGQLEVEVIQ

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

47.9

-0.1

1.6

57.1

49.4

Major PPT

59.1

0.21

51.1

37.9

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

36.1

-1.2

2.4

36.66

Associated Gene:

Gene:

RIMS3

Ensembl Gene ID:

ENSAPLG00000003119

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003160

6143134 - 6146488

3355