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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6170809_6174534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6170809 - 6174534

Intron Length:

3726

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAGAGCTG

5'SS Class:

major

3'SS Sequence:

AATCTCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AGTCTCTCAAAT

Flanking Amino Acid:

WSWSVTPCEEKDFRVQELPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

62.8

41.6

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

77.3

0.61

0.9

70.5

35.2

Minor 5ss

-3.2

4.3

37.1

47.5

Minor BPS

53.4

0.19

1.6

70.54

39.5

Associated Gene:

Gene:

NFYC

Ensembl Gene ID:

ENSAPLG00000002519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033459

6170758 - 6188730

17973