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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6174607_6176159_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6174607 - 6176159

Intron Length:

1553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAATCG

5'SS Class:

major

3'SS Sequence:

AATTTAATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GTAAATTTAATT

Flanking Amino Acid:

KIMKLDEDVKMISAEAPVLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

59.5

40.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

75.1

0.57

67.3

Minor 5ss

36.5

-1.5

3.3

48.4

47.3

Minor BPS

58.3

0.34

1.5

71.55

39.2

Associated Gene:

Gene:

NFYC

Ensembl Gene ID:

ENSAPLG00000002519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033459

6170758 - 6188730

17973

ENSAPLT00000002552

6171098 - 6188730

17633