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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6187265_6188015_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6187265 - 6188015

Intron Length:

751

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACT

5'SS Class:

strong_major

3'SS Sequence:

CTTACCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

CTTCTCTTACCC

Flanking Amino Acid:

IQTLATNAQQITQTEVQQGQ

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

75.3

40.8

Major BPS

0.57

1.2

41.2

Major PPT

80.2

0.68

0.8

73.4

31.4

Minor 5ss

40.6

-1

3.2

58.1

46.3

Minor BPS

61.8

0.35

1.7

71.01

40.5

Associated Gene:

Gene:

NFYC

Ensembl Gene ID:

ENSAPLG00000002519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028300

6171098 - 6188730

17633

ENSAPLT00000020590

6171098 - 6188730

17633

ENSAPLT00000033459

6170758 - 6188730

17973