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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6187304_6188015_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6187304 - 6188015

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGTTGTTC

5'SS Class:

weak_major

3'SS Sequence:

CTTACCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

CTTCTCTTACCC

Flanking Amino Acid:

LTAGLTLTGKITQTEVQQGQ

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

58.2

35.2

Major BPS

0.57

1.2

41.2

Major PPT

80.2

0.68

0.8

73.4

31.4

Minor 5ss

43.7

-0.7

3.2

58.1

41.3

Minor BPS

61.8

0.35

1.7

71.01

40.5

Associated Gene:

Gene:

NFYC

Ensembl Gene ID:

ENSAPLG00000002519

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002552

6171098 - 6188730

17633