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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6238166_6238273_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6238166 - 6238273

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

AGCTGTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

ACCCCCCCAAGC

Flanking Amino Acid:

TPGTGQPGRPGKPGLPGIRG

Intron Amino Acid Position:

914

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.9

0.33

1.3

57.9

41.8

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

0.34

57.9

42.6

Minor 5ss

29.5

-2.4

3.1

39.8

Minor BPS

41.4

-0.6

47.13

41.9

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734