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Intron Name: Anas_platyrhynchos_platyrhynchos_24_6238609_6238694_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6238609 - 6238694

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTGCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CTCTTTTTGCCA

Flanking Amino Acid:

PGDAGQKGQKGAAGSPGDPG

Intron Amino Acid Position:

837

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

80.6

0.69

0.9

75.9

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

42.1

-0.6

3.4

60.52

40.5

Associated Gene:

Gene:

COL16A1

Ensembl Gene ID:

ENSAPLG00000024730

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021875

6237728 - 6249461

11734